Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015861798.1_cds_XP_016515076.1_27457
CDS Infomation

[gene=LOC107831795] [db_xref=GeneID:107831795] [protein=probable ubiquitin-like-specific protease 2B isoform X3] [protein_id=XP_016515076.1] [location=join(128619..128718,132533..132795,132916..133003,133099..133148,133783..133983,134074..134149,137358..137469,138056..138130,139611..139742,140006..140206,140292..140347,140424..140520,142473..142563,148298..148420,149964..150374,152872..153474)] [gbkey=CDS]
Sequence

ATGAAGAATCCTACGGACGTTTTTGAGTTCAAACTTGAGGAGCAGCCTTCGGAAATCGAA
GCTAATAGGTTTTGCAGCAAGTATACATTCACCCAAAATGGTGCACGAGGAACCAATATA
AACTCAAAGGAGACTGGTGATGAACCTACTGTAGATATGGAAGCAGCTGACGGTGATTTT
AATGGTAAAAGTGCTCCCTCAAGTCTGGATGCAGAAGATTGTAGTGATGAGAGAATGCTG
AGATTGGGGGGCATTCCAACAATTACTTCGACAAAACAAAGGCGATATCCTGATAGGGAA
CCTAACAATTGTATAGATGGAAGTTTCTTGGAAGGCAGTTCATATACTGGAACAGCTTTT
CAGGATGAATCAGTTGGCACGGATTCTGATGTTGATGAAAGCAGAAGTGATGAATCAGCA
TCATACTCATCTGCCACCCCAGACAATCATGACATCTTAGATGGACCATTATCAAATCAT
CAGTTTGACCAGTGGGGAATGTTTGAAAACAAGCCAATTGTTTTCTGTCCTGATTATCTC
TATTATCGAGGAACATCCTACGCAGTCACAGACACTACAGTAACCTTTTCCAGTAATTGT
GTTGAGGTCAAAGGCTCAACACTGAACGGGGATTCAGAGACATCTTGCATTCGCTTTGGA
GTTGAAGACGTATTCCAAATTCAATCTCATTTGTCAGGGAGGTTTGACGTGGCTGTGTTT
AAGATTCATGTAAATAAAAGATCAACAACACAAGGTGAAAATGCTCACGAGAGTTCTGTG
CTTAATGTCAAAGGTATTGAGGAGGTGGAGTTTGCTGTTAATGATTTTGACTTGTCCGAG
AAATGTGAAGCAATTCAATCTTTGGATGGCTACAAAGCAGTATGGAACTACAATGAGATT
GAAGAATGCAGGGAGAATTCACATGGAGAAACATCAGATCAGCAATCTAAGAAATATTTT
CCAAGTTACGGTGAGCCGCTTGAAGAAGTTTATTATCCTAAAGGAGATCCTGATGCTGTT
TGCATTAGTAAGAGGGACTTTGATCTTCTGGCACCAGAAACATTTGTCAATGATACAATT
ATTGATTTCTACATACAGTATTTAAAGAATGGAATTCCACCAGAGAGGAGGCAACGATAC
CATTTCTTTAACTGTTTCTTTTTTCGAAAGTTGGCTGACATGGATAAAGATCCAACCAGT
GCATTTGATGGTCGTGCTGCTTTTTTGCGTGTCCGTAAGTGGACAAGGAAAGTGGACTTA
TTTGATAAGGACTTTGTTTTCATTCCTGTAAATTACAATTATCACTGGAGTCTGATTGTC
ATATGCCATCCTGGTGAAGTGGCTAACTTTACAGATGATGATTCTGCAGTTAGCTCAGTC
AAAGTACCATGTATATTGCACATGGATTCTTTTAGAGGAAGTCATGTGGGTCTCAAAGAT
CTTCTGCAAAGCTACCTCTGGGAGGAATGGAAAGAGAGGACAAAGGAAACGCCTGAAGTT
GTCTCCTCAAATTTTCGAAATTTGAAATTTCTCTCTCTTGAGCTACCACAACAGCAAAAT
CTATCAGACTGTGGTCTCTTTTTACTACACTATGTGGAGCACTTTTTGGCGGAAGATCCT
GCTTGTATCAGTCCATACAGGATAAAGAACTACCACAATGAATTTCTAAGTGTAAACTGG
TTTCAACCTCATGAGCCTTCTATAAAGCGCAGTGCAATTCAAAGACTAATCAGTAACCTC
CTCAAGAACCTTTCTCTAGAAAATTCTCCCTCTTGTGCGAGTGACAGTTGCTTTCCTGAA
GGTGGTCTCAAGACGAGCAATTATGATGAAAATGCTGTAGAATTAGTATCTGAGCAATTT
CGTTCATCAAAGAGTTCAGACAATTTACCATGTTCTCAAGCTAATGAGATAAACCCATTT
CCTACTTCCTCCCTCGGGGGTGTTTGTGCTAGTGATTCAGGCCTTGTTTTGAACGAATCT
TTTGAGCCTGAATCTGATGAAGAGTCATTGCTTGACATGCGCTTTGGTCACTCAGCATCT
TTTAACGAGTTCAGGAGTTCATTGCCACCAATACAGGAAGAGGTAGAAGCTAGAGAGCAC
CTTGTGTATGCATCAACTGAGACTGGTCTTCAACATCTGGGTGGTAGTGGATCTGAACCC
TGTGCTTTATCCTATTCATCCGGGTCTCTGACTGCTGAAGCTTCCTGGATACCTGGAGTG
TCAGTTGTCGAAGCTGTGGACGAGGAAGACTCATCACCAACTACTTCAGTCCACGATTCT
GAAAATCCATTGGAAGTTGAGGTTGTAGAACCATGCAGAGTAGATCAAAACATGAATTCA
GATGACAAAATTAATCATCCAAAATCTGCATCTGTCAATAATATTGACTGTTTGGTTGAT
GGCGAAGCCGCTTCTGGCGAGCTGCTGGACATCACTTTGGCACAATGCTCTGCCGAGACA
CATGATAACAGTGATACTGGTCCTGTCACCTCTTGCCAGGAAAACCTATATGATATCCAT
GGGAATGGAAACCTTGCCTGTAAACGTTTGCTGCTCATTGGTAGTGGTCCTGGCTCAGAA
GCAGATGCTCAACACAATGTGAAAAGGATACGTCTTACACCCTTGGATGAAGGGGAATTA
GCATGTAGAAGTAACTTGTTAGATGATCTGCATTTGTAG

Peptide Sequence

PEP ID

XP_016515076.1
PEP Infomation

PREDICTED: probable ubiquitin-like-specific protease 2B isoform X3 [Nicotiana tabacum]
Sequence

MKNPTDVFEFKLEEQPSEIEANRFCSKYTFTQNGARGTNINSKETGDEPTVDMEAADGDF
NGKSAPSSLDAEDCSDERMLRLGGIPTITSTKQRRYPDREPNNCIDGSFLEGSSYTGTAF
QDESVGTDSDVDESRSDESASYSSATPDNHDILDGPLSNHQFDQWGMFENKPIVFCPDYL
YYRGTSYAVTDTTVTFSSNCVEVKGSTLNGDSETSCIRFGVEDVFQIQSHLSGRFDVAVF
KIHVNKRSTTQGENAHESSVLNVKGIEEVEFAVNDFDLSEKCEAIQSLDGYKAVWNYNEI
EECRENSHGETSDQQSKKYFPSYGEPLEEVYYPKGDPDAVCISKRDFDLLAPETFVNDTI
IDFYIQYLKNGIPPERRQRYHFFNCFFFRKLADMDKDPTSAFDGRAAFLRVRKWTRKVDL
FDKDFVFIPVNYNYHWSLIVICHPGEVANFTDDDSAVSSVKVPCILHMDSFRGSHVGLKD
LLQSYLWEEWKERTKETPEVVSSNFRNLKFLSLELPQQQNLSDCGLFLLHYVEHFLAEDP
ACISPYRIKNYHNEFLSVNWFQPHEPSIKRSAIQRLISNLLKNLSLENSPSCASDSCFPE
GGLKTSNYDENAVELVSEQFRSSKSSDNLPCSQANEINPFPTSSLGGVCASDSGLVLNES
FEPESDEESLLDMRFGHSASFNEFRSSLPPIQEEVEAREHLVYASTETGLQHLGGSGSEP
CALSYSSGSLTAEASWIPGVSVVEAVDEEDSSPTTSVHDSENPLEVEVVEPCRVDQNMNS
DDKINHPKSASVNNIDCLVDGEAASGELLDITLAQCSAETHDNSDTGPVTSCQENLYDIH
GNGNLACKRLLLIGSGPGSEADAQHNVKRIRLTPLDEGELACRSNLLDDLHL

Transcript Sequence

Gene sequence data has not been registered.